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SRX6827217: WGS of Escherichia coli
1 ILLUMINA (NextSeq 500) run: 1.1M spots, 335M bases, 129.2Mb downloads

Design: WGS data of bacteria collected from hospital ICU surfaces and sequenced using a modified nextera protocol on an Illumina NextSeq Hioutput lane
Submitted by: Washington University in St. Louis School of Medicine
Study: Pakistan and United States ICU transmission dynamics
PRJNA497126 • SRP221243 • All experiments • All runs
show Abstracthide Abstract
Use selective bacterial culture to understand the identity, prevalence, persistence, and transmission of bacteria contaminating hospital intensive care unit surfaces in two countries.
Sample:
SAMN10249110 • SRS5369514 • All experiments • All runs
Organism: Escherichia coli
Library:
Name: EC_119
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.1M spots, 335M bases, 129.2Mb
Run# of Spots# of BasesSizePublished
SRR100943391,116,691335M129.2Mb2019-09-10

ID:
8988174

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